A look back at the Open House Day of the IBGC (2025) Authors: Florian Specque, Daniel Garcia Ruano. On Saturday October 11th, in the context of the 2025 edition of the science festival ("Fête de la science"), the IBGC opened its doors to the general public for an afternoon. It was the perfect occasion to discover the institute's
SeuratIntegrate: an R package to facilitate the use of integration methods with Seurat Available on GitHub (cbib/Seurat-Integrate) and complemented by online documentation, examples, tutorials, and more. To bring the power of Scanorama, BBKNN, scVI and others to Seurat, give it a try!
TrialMatchAI: Harnessing Large Language Models (LLMs) to Match Cancer Patients with Molecularly-driven Clinical Trials – Part of the European Open Science Cloud for Cancer Project Introduction In the fast-growing landscape of cancer treatment, the paradigm is shifting towards personalized medicine—a tailored approach that recognizes the unique genetic and clinical characteristics of cancer patients. At the core of this paradigm shift are precision clinical trials that drive advancements in personalized cancer therapeutics. By matching patients
3rd poster prize at 9th Immunotherapy of Cancer Conference Domitille Chalopin received the 3rd poster prize at the 9th Immunotherapy of Cancer Conference (ITOC, September 22 to 24, 2022).
Publications Deep Learning for automatic signal enhancement in biological imaging Deep Learning for mRNA spot enhancement in fluorescent microscopy FISH images
Projects Unsupervised segmentation of nuclei in fluorescence microscopy images using Deep Learning Development of unsupervised Deep Learning methods for segmentation of liver spheroids acquired with the soSPIM in 3D and prediction of temporal phenotypes of spheroids
